BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A10LP1|AL426778
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig136 994 0.0
>3x_Contig136
Length = 535
Score = 994 bits (501), Expect = 0.0
Identities = 530/537 (98%), Gaps = 2/537 (0%)
Strand = Plus / Plus
Query: 382 tattgatgttgtgcggaagtatatgttatgtgatttccaggtacctctctgtaggagcca 441
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tattgatgttgtgcggaagtatatgttatgtgatttc-aggtacctctctgtaggagcca 59
Query: 442 agtttgtaaaattttaggtctactggcagcataactaaacggaaacatattcacacttat 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 agtttgtaaaattttaggtctactggcagcataactaaacggaaacatattcacacttat 119
Query: 502 atccaatatatatatgtacatgatataattgacagattttaactgttgatcgtcagtctg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atccaatatatatatgtacatgatataattgacagattttaactgttgatcgtcagtctg 179
Query: 562 atgtgatgacactgtcactggacagaagccgaacacaggtcacatgactaacatatgttt 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgtgatgacactgtcactggacagaagccgaacacaggtcacatgactaacatatgttt 239
Query: 622 tctgggactgtttgagaatgtacggatgtagttttttcaaacactagaaaaccaacaata 681
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 240 tctgggactgtttgagaatgtacggatgtagttttttcaaa-actagaaaaccatcaata 298
Query: 682 tattacctaaataggaataaagttttcaaaactcatcaactcactgacatcgacaaattt 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tattacctaaataggaataaagttttcaaaactcatcaactcactgacatcgacaaattt 358
Query: 742 cacatcgttacgagtagtgcatatatgaagaaaccatctttcaatacagttaatcatacc 801
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cacattgttacgagtagtgcatatatgaagaaaccatctttcaatacagttaatcatacc 418
Query: 802 attaagcatatgttctaatgtactattatctcgattaattcttgaaagaacacacacaat 861
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 419 attaagcatatgttctaatgtactattatctcgattaattcttgatagaacacacacaat 478
Query: 862 aagcaagtctcaaaatgggtattgatcacacttccaagcaacacaagagatccagtc 918
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 479 aagcaagtctcaaaatgggtattgatcacactttctagcaacacaagagatccagtc 535
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7609
Number of Sequences: 1807
Number of extensions: 7609
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)